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Lionel Mandrake

Lionel Mandrake's Journal
Lionel Mandrake's Journal
July 31, 2015

Yosemite sleep deprivation

Sleep has always been flaky under Windows, but it has always been solid under Mac OS X until I "upgraded" to Yosemite. For the first time ever, I am having trouble putting a Mac to sleep. Sometimes it goes to sleep and stays asleep. Other times it wakes up almost immediately. Then I have to shut it down instead.

July 4, 2015

Color vision and X-inactivation.

Normal color vision in humans is said to be trichromatic, since there are normally three types of cones in our retinas. The most common types of color deficiencies result from abnormal or missing genes on our X chromosomes. Most of the readers in the Science Group have probably heard that many men, but few women, are "red-green colorblind". This trait is said to be sex-linked and recessive, like baldness and many other abnormalities that affect more men than women.

Roughly speaking, if a man has such a trait and a woman is not a carrier for that trait, their children will not have the trait, but half of their daughters will be carriers. If a woman is a carrier and a man does not have the trait, half of their sons will have the trait, and half of their daughters will be carriers. If a woman is a carrier and a man has the trait, then half of their children of either sex will have the trait, and the daughters who don't have the trait will be carriers. These statements follow from the facts that every female cell has two X chromosomes and every male cell has only one X chromosome.

But the real situation is more complicated. In very precise color-matching experiments, women who are normally considered to be carriers have been shown to have a slight deficit compared to women who are not carriers. In other words, the genes for color deficiencies are not completely recessive. This has to do with the fact that one of the X chromosomes in each cell of a woman's body is inactivated, i.e., most of its genes are not expressed. The reason for X inactivation is to prevent a mismatch between males and females in the amounts of messenger RNA (and hence the amounts of protein) that are produced. In animals (but not plants) if the level of gene expression is off by a factor of two, the results are usually deleterious and often fatal. Even if the level is only off by 50%, as in trisomy 21 (Down Syndrome), there are serious consequences.

A female "carrier" of a sex-linked trait will have clumps of cells in which the X chromosome inherited from her father is inactivated, and other clumps in which the X chromosome inherited from her mother is inactivated. The patches of fur in a calico cat are similarly explained. The retina in each eye will have abnormal patches and normal patches. It's not surprising that such an eye does not perform quite as well as a completely normal eye.

Profile Information

Gender: Male
Hometown: The Left Coast
Home country: USA
Current location: electrical wires
Member since: Sun Jul 1, 2007, 06:47 PM
Number of posts: 4,076

About Lionel Mandrake

I study, play the piano, play chess and go, and enjoy the company of my wife, children, grandchildren, other relatives, and friends. I am a perennial student at a school where they let me attend classes and use the library for free (because I'm old). My serious reading includes math, science, history, and biography. I enjoy science fiction and mysteries, which my wife and I refer to as "mind rot". And now on to politics. I hated Nixon and Reagan. I think W is a war criminal and was easily the worst president in US history until Trump came along. Trump and Sessions should be tried for having separated small children from their parents, which was a crime against humanity. I will support any candidate who is a "dove". I support "plan B" without prescription for girls of all ages. I support free abortion on demand, without delay, and without the requirement to notify anyone, for all women and girls who want it. I think it's time to repeal the Bush/Trump tax cuts for corporations and the very rich.
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